From d5ee557ef1370b5b9953dca1c8d3b14d0bd68a98 Mon Sep 17 00:00:00 2001
From: James Moger <james.moger@gitblit.com>
Date: Thu, 02 May 2013 22:31:58 -0400
Subject: [PATCH] Do not use problematic WicketUtils fluid api

---
 src/main/java/com/gitblit/GitBlit.java |  208 ++++++++++++++++++++++++++++++++++-----------------
 1 files changed, 137 insertions(+), 71 deletions(-)

diff --git a/src/main/java/com/gitblit/GitBlit.java b/src/main/java/com/gitblit/GitBlit.java
index 4cfd61e..377a7b3 100644
--- a/src/main/java/com/gitblit/GitBlit.java
+++ b/src/main/java/com/gitblit/GitBlit.java
@@ -54,6 +54,8 @@
 
 import javax.mail.Message;
 import javax.mail.MessagingException;
+import javax.mail.internet.MimeBodyPart;
+import javax.mail.internet.MimeMultipart;
 import javax.servlet.ServletContext;
 import javax.servlet.ServletContextEvent;
 import javax.servlet.ServletContextListener;
@@ -69,7 +71,6 @@
 import org.eclipse.jgit.lib.RepositoryCache.FileKey;
 import org.eclipse.jgit.lib.StoredConfig;
 import org.eclipse.jgit.storage.file.FileBasedConfig;
-import org.eclipse.jgit.storage.file.WindowCache;
 import org.eclipse.jgit.storage.file.WindowCacheConfig;
 import org.eclipse.jgit.util.FS;
 import org.eclipse.jgit.util.FileUtils;
@@ -88,6 +89,7 @@
 import com.gitblit.fanout.FanoutNioService;
 import com.gitblit.fanout.FanoutService;
 import com.gitblit.fanout.FanoutSocketService;
+import com.gitblit.git.GitDaemon;
 import com.gitblit.models.FederationModel;
 import com.gitblit.models.FederationProposal;
 import com.gitblit.models.FederationSet;
@@ -188,6 +190,8 @@
 	
 	private FanoutService fanoutService;
 
+	private GitDaemon gitDaemon;
+	
 	public GitBlit() {
 		if (gitblit == null) {
 			// set the static singleton reference
@@ -452,12 +456,13 @@
 	 * advertise alternative urls for Git client repository access.
 	 * 
 	 * @param repositoryName
+	 * @param userName
 	 * @return list of non-gitblit clone urls
 	 */
-	public List<String> getOtherCloneUrls(String repositoryName) {
+	public List<String> getOtherCloneUrls(String repositoryName, String username) {
 		List<String> cloneUrls = new ArrayList<String>();
 		for (String url : settings.getStrings(Keys.web.otherUrls)) {
-			cloneUrls.add(MessageFormat.format(url, repositoryName));
+			cloneUrls.add(MessageFormat.format(url, repositoryName, username));
 		}
 		return cloneUrls;
 	}
@@ -613,7 +618,7 @@
 			X509Metadata metadata = HttpUtils.getCertificateMetadata(httpRequest);
 			if (user != null) {
 				flagWicketSession(AuthenticationType.CERTIFICATE);
-				logger.info(MessageFormat.format("{0} authenticated by client certificate {1} from {2}",
+				logger.debug(MessageFormat.format("{0} authenticated by client certificate {1} from {2}",
 						user.username, metadata.serialNumber, httpRequest.getRemoteAddr()));
 				return user;
 			} else {
@@ -630,15 +635,18 @@
 		// try to authenticate by servlet container principal
 		Principal principal = httpRequest.getUserPrincipal();
 		if (principal != null) {
-			UserModel user = getUserModel(principal.getName());
-			if (user != null) {
-				flagWicketSession(AuthenticationType.CONTAINER);
-				logger.info(MessageFormat.format("{0} authenticated by servlet container principal from {1}",
-						user.username, httpRequest.getRemoteAddr()));
-				return user;
-			} else {
-				logger.warn(MessageFormat.format("Failed to find UserModel for {0}, attempted servlet container authentication from {1}",
-						principal.getName(), httpRequest.getRemoteAddr()));
+			String username = principal.getName();
+			if (StringUtils.isEmpty(username)) {
+				UserModel user = getUserModel(username);
+				if (user != null) {
+					flagWicketSession(AuthenticationType.CONTAINER);
+					logger.debug(MessageFormat.format("{0} authenticated by servlet container principal from {1}",
+							user.username, httpRequest.getRemoteAddr()));
+					return user;
+				} else {
+					logger.warn(MessageFormat.format("Failed to find UserModel for {0}, attempted servlet container authentication from {1}",
+							principal.getName(), httpRequest.getRemoteAddr()));
+				}
 			}
 		}
 		
@@ -647,7 +655,7 @@
 			UserModel user = authenticate(httpRequest.getCookies());
 			if (user != null) {
 				flagWicketSession(AuthenticationType.COOKIE);
-				logger.info(MessageFormat.format("{0} authenticated by cookie from {1}",
+				logger.debug(MessageFormat.format("{0} authenticated by cookie from {1}",
 						user.username, httpRequest.getRemoteAddr()));
 				return user;
 			}
@@ -669,7 +677,7 @@
 				UserModel user = authenticate(username, password);
 				if (user != null) {
 					flagWicketSession(AuthenticationType.CREDENTIALS);
-					logger.info(MessageFormat.format("{0} authenticated by BASIC request header from {1}",
+					logger.debug(MessageFormat.format("{0} authenticated by BASIC request header from {1}",
 							user.username, httpRequest.getRemoteAddr()));
 					return user;
 				} else {
@@ -1286,7 +1294,15 @@
 		for (String repo : list) {
 			RepositoryModel model = getRepositoryModel(user, repo);
 			if (model != null) {
-				repositories.add(model);
+				if (!model.hasCommits) {
+					// only add empty repositories that user can push to
+					if (UserModel.ANONYMOUS.canPush(model)
+							|| user != null && user.canPush(model)) {
+						repositories.add(model);
+					}
+				} else {
+					repositories.add(model);
+				}
 			}
 		}
 		if (getBoolean(Keys.web.showRepositorySizes, true)) {
@@ -1373,7 +1389,7 @@
 		FileBasedConfig config = (FileBasedConfig) getRepositoryConfig(r);
 		if (config.isOutdated()) {
 			// reload model
-			logger.info(MessageFormat.format("Config for \"{0}\" has changed. Reloading model and updating cache.", repositoryName));
+			logger.debug(MessageFormat.format("Config for \"{0}\" has changed. Reloading model and updating cache.", repositoryName));
 			model = loadRepositoryModel(model.name);
 			removeFromCachedRepositoryList(model.name);
 			addToCachedRepositoryList(model);
@@ -1656,6 +1672,11 @@
 		} else {
 			model.name = com.gitblit.utils.FileUtils.getRelativePath(basePath, r.getDirectory().getParentFile());
 		}
+		if (StringUtils.isEmpty(model.name)) {
+			// Repository is NOT located relative to the base folder because it
+			// is symlinked.  Use the provided repository name.
+			model.name = repositoryName;
+		}
 		model.hasCommits = JGitUtils.hasCommits(r);
 		model.lastChange = JGitUtils.getLastChange(r);
 		model.projectPath = StringUtils.getFirstPathElement(repositoryName);
@@ -1668,6 +1689,8 @@
 			model.addOwners(ArrayUtils.fromString(getConfig(config, "owner", "")));
 			model.useTickets = getConfig(config, "useTickets", false);
 			model.useDocs = getConfig(config, "useDocs", false);
+			model.useIncrementalPushTags = getConfig(config, "useIncrementalPushTags", false);
+			model.incrementalPushTagPrefix = getConfig(config, "incrementalPushTagPrefix", null);
 			model.allowForks = getConfig(config, "allowForks", true);
 			model.accessRestriction = AccessRestrictionType.fromName(getConfig(config,
 					"accessRestriction", settings.getString(Keys.git.defaultAccessRestriction, null)));
@@ -1827,6 +1850,9 @@
 		} else {
 			// not caching
 			ProjectModel project = getProjectModel(userProject);
+			if (project == null) {
+				return null;
+			}
 			for (String repository : project.repositories) {
 				if (repository.startsWith(userProject)) {
 					RepositoryModel model = getRepositoryModel(repository);
@@ -2186,6 +2212,13 @@
 		config.setString(Constants.CONFIG_GITBLIT, null, "owner", ArrayUtils.toString(repository.owners));
 		config.setBoolean(Constants.CONFIG_GITBLIT, null, "useTickets", repository.useTickets);
 		config.setBoolean(Constants.CONFIG_GITBLIT, null, "useDocs", repository.useDocs);
+		config.setBoolean(Constants.CONFIG_GITBLIT, null, "useIncrementalPushTags", repository.useIncrementalPushTags);
+		if (StringUtils.isEmpty(repository.incrementalPushTagPrefix) ||
+				repository.incrementalPushTagPrefix.equals(settings.getString(Keys.git.defaultIncrementalPushTagPrefix, "r"))) {
+			config.unset(Constants.CONFIG_GITBLIT, null, "incrementalPushTagPrefix");
+		} else {
+			config.setString(Constants.CONFIG_GITBLIT, null, "incrementalPushTagPrefix", repository.incrementalPushTagPrefix);
+		}
 		config.setBoolean(Constants.CONFIG_GITBLIT, null, "allowForks", repository.allowForks);
 		config.setString(Constants.CONFIG_GITBLIT, null, "accessRestriction", repository.accessRestriction.name());
 		config.setString(Constants.CONFIG_GITBLIT, null, "authorizationControl", repository.authorizationControl.name());
@@ -2572,17 +2605,8 @@
 		}
 
 		// send an email, if possible
-		try {
-			Message message = mailExecutor.createMessageForAdministrators();
-			if (message != null) {
-				message.setSubject("Federation proposal from " + proposal.url);
-				message.setText("Please review the proposal @ " + gitblitUrl + "/proposal/"
-						+ proposal.token);
-				mailExecutor.queue(message);
-			}
-		} catch (Throwable t) {
-			logger.error("Failed to notify administrators of proposal", t);
-		}
+		sendMailToAdministrators("Federation proposal from " + proposal.url,
+				"Please review the proposal @ " + gitblitUrl + "/proposal/" + proposal.token);
 		return true;
 	}
 
@@ -2869,16 +2893,8 @@
 	 * @param message
 	 */
 	public void sendMailToAdministrators(String subject, String message) {
-		try {
-			Message mail = mailExecutor.createMessageForAdministrators();
-			if (mail != null) {
-				mail.setSubject(subject);
-				mail.setText(message);
-				mailExecutor.queue(mail);
-			}
-		} catch (MessagingException e) {
-			logger.error("Messaging error", e);
-		}
+		List<String> toAddresses = settings.getStrings(Keys.mail.adminAddresses);
+		sendMail(subject, message, toAddresses);
 	}
 
 	/**
@@ -2900,11 +2916,24 @@
 	 * @param toAddresses
 	 */
 	public void sendMail(String subject, String message, String... toAddresses) {
+		if (toAddresses == null || toAddresses.length == 0) {
+			logger.debug(MessageFormat.format("Dropping message {0} because there are no recipients", subject));
+			return;
+		}
 		try {
 			Message mail = mailExecutor.createMessage(toAddresses);
 			if (mail != null) {
 				mail.setSubject(subject);
-				mail.setText(message);
+				
+				MimeBodyPart messagePart = new MimeBodyPart();				
+				messagePart.setText(message, "utf-8");
+				messagePart.setHeader("Content-Type", "text/plain; charset=\"utf-8\"");
+				messagePart.setHeader("Content-Transfer-Encoding", "quoted-printable");
+				
+				MimeMultipart multiPart = new MimeMultipart();
+				multiPart.addBodyPart(messagePart);
+				mail.setContent(multiPart);
+				
 				mailExecutor.queue(mail);
 			}
 		} catch (MessagingException e) {
@@ -2931,11 +2960,24 @@
 	 * @param toAddresses
 	 */
 	public void sendHtmlMail(String subject, String message, String... toAddresses) {
+		if (toAddresses == null || toAddresses.length == 0) {
+			logger.debug(MessageFormat.format("Dropping message {0} because there are no recipients", subject));
+			return;
+		}
 		try {
 			Message mail = mailExecutor.createMessage(toAddresses);
 			if (mail != null) {
 				mail.setSubject(subject);
-				mail.setContent(message, "text/html");
+				
+				MimeBodyPart messagePart = new MimeBodyPart();				
+				messagePart.setText(message, "utf-8");
+				messagePart.setHeader("Content-Type", "text/html; charset=\"utf-8\"");
+				messagePart.setHeader("Content-Transfer-Encoding", "quoted-printable");
+				
+				MimeMultipart multiPart = new MimeMultipart();
+				multiPart.addBodyPart(messagePart);
+				mail.setContent(multiPart);
+
 				mailExecutor.queue(mail);
 			}
 		} catch (MessagingException e) {
@@ -2968,11 +3010,10 @@
 	 * Parse the properties file and aggregate all the comments by the setting
 	 * key. A setting model tracks the current value, the default value, the
 	 * description of the setting and and directives about the setting.
-	 * @param referencePropertiesInputStream
 	 * 
 	 * @return Map<String, SettingModel>
 	 */
-	private ServerSettings loadSettingModels(InputStream referencePropertiesInputStream) {
+	private ServerSettings loadSettingModels() {
 		ServerSettings settingsModel = new ServerSettings();
 		settingsModel.supportsCredentialChanges = userService.supportsCredentialChanges();
 		settingsModel.supportsDisplayNameChanges = userService.supportsDisplayNameChanges();
@@ -2982,7 +3023,7 @@
 			// Read bundled Gitblit properties to extract setting descriptions.
 			// This copy is pristine and only used for populating the setting
 			// models map.
-			InputStream is = referencePropertiesInputStream;
+			InputStream is = getClass().getResourceAsStream("/reference.properties");
 			BufferedReader propertiesReader = new BufferedReader(new InputStreamReader(is));
 			StringBuilder description = new StringBuilder();
 			SettingModel setting = new SettingModel();
@@ -3087,18 +3128,34 @@
 		projectConfigs = new FileBasedConfig(getFileOrFolder(Keys.web.projectsFile, "${baseFolder}/projects.conf"), FS.detect());
 		getProjectConfigs();
 		
-		// schedule mail engine
+		configureMailExecutor();		
+		configureLuceneIndexing();
+		configureGarbageCollector();
+		if (startFederation) {
+			configureFederation();
+		}
+		configureJGit();
+		configureFanout();
+		configureGitDaemon();
+		
+		ContainerUtils.CVE_2007_0450.test();
+	}
+	
+	protected void configureMailExecutor() {
 		if (mailExecutor.isReady()) {
 			logger.info("Mail executor is scheduled to process the message queue every 2 minutes.");
 			scheduledExecutor.scheduleAtFixedRate(mailExecutor, 1, 2, TimeUnit.MINUTES);
 		} else {
 			logger.warn("Mail server is not properly configured.  Mail services disabled.");
 		}
-		
-		// schedule lucene engine
-		enableLuceneIndexing();
-
-		
+	}
+	
+	protected void configureLuceneIndexing() {
+		scheduledExecutor.scheduleAtFixedRate(luceneExecutor, 1, 2,  TimeUnit.MINUTES);
+		logger.info("Lucene executor is scheduled to process indexed branches every 2 minutes.");
+	}
+	
+	protected void configureGarbageCollector() {
 		// schedule gc engine
 		if (gcExecutor.isReady()) {
 			logger.info("GC executor is scheduled to scan repositories every 24 hours.");
@@ -3122,23 +3179,21 @@
 			logger.info(MessageFormat.format("Next scheculed GC scan is in {0}", when));
 			scheduledExecutor.scheduleAtFixedRate(gcExecutor, delay, 60*24, TimeUnit.MINUTES);
 		}
-		
-		if (startFederation) {
-			configureFederation();
-		}
-		
+	}
+	
+	protected void configureJGit() {
 		// Configure JGit
 		WindowCacheConfig cfg = new WindowCacheConfig();
-		
+
 		cfg.setPackedGitWindowSize(settings.getFilesize(Keys.git.packedGitWindowSize, cfg.getPackedGitWindowSize()));
 		cfg.setPackedGitLimit(settings.getFilesize(Keys.git.packedGitLimit, cfg.getPackedGitLimit()));
 		cfg.setDeltaBaseCacheLimit(settings.getFilesize(Keys.git.deltaBaseCacheLimit, cfg.getDeltaBaseCacheLimit()));
 		cfg.setPackedGitOpenFiles(settings.getFilesize(Keys.git.packedGitOpenFiles, cfg.getPackedGitOpenFiles()));
 		cfg.setStreamFileThreshold(settings.getFilesize(Keys.git.streamFileThreshold, cfg.getStreamFileThreshold()));
 		cfg.setPackedGitMMAP(settings.getBoolean(Keys.git.packedGitMmap, cfg.isPackedGitMMAP()));
-		
+
 		try {
-			WindowCache.reconfigure(cfg);
+			cfg.install();
 			logger.debug(MessageFormat.format("{0} = {1,number,0}", Keys.git.packedGitWindowSize, cfg.getPackedGitWindowSize()));
 			logger.debug(MessageFormat.format("{0} = {1,number,0}", Keys.git.packedGitLimit, cfg.getPackedGitLimit()));
 			logger.debug(MessageFormat.format("{0} = {1,number,0}", Keys.git.deltaBaseCacheLimit, cfg.getDeltaBaseCacheLimit()));
@@ -3148,16 +3203,16 @@
 		} catch (IllegalArgumentException e) {
 			logger.error("Failed to configure JGit parameters!", e);
 		}
-
-		ContainerUtils.CVE_2007_0450.test();
-		
+	}
+	
+	protected void configureFanout() {
 		// startup Fanout PubSub service
 		if (settings.getInteger(Keys.fanout.port, 0) > 0) {
 			String bindInterface = settings.getString(Keys.fanout.bindInterface, null);
 			int port = settings.getInteger(Keys.fanout.port, FanoutService.DEFAULT_PORT);
 			boolean useNio = settings.getBoolean(Keys.fanout.useNio, true);
 			int limit = settings.getInteger(Keys.fanout.connectionLimit, 0);
-			
+
 			if (useNio) {
 				if (StringUtils.isEmpty(bindInterface)) {
 					fanoutService = new FanoutNioService(port);
@@ -3171,16 +3226,26 @@
 					fanoutService = new FanoutSocketService(bindInterface, port);
 				}
 			}
-			
+
 			fanoutService.setConcurrentConnectionLimit(limit);
 			fanoutService.setAllowAllChannelAnnouncements(false);
 			fanoutService.start();
 		}
 	}
 	
-	protected void enableLuceneIndexing() {
-		scheduledExecutor.scheduleAtFixedRate(luceneExecutor, 1, 2,  TimeUnit.MINUTES);
-		logger.info("Lucene executor is scheduled to process indexed branches every 2 minutes.");
+	protected void configureGitDaemon() {
+		String bindInterface = settings.getString(Keys.git.daemonBindInterface, "localhost");
+		int port = settings.getInteger(Keys.git.daemonPort, 0);
+		if (port > 0) {
+			try {
+				gitDaemon = new GitDaemon(bindInterface, port, getRepositoriesFolder());
+				gitDaemon.start();
+				logger.info(MessageFormat.format("Git daemon is listening on {0}:{1,number,0}", bindInterface, port));
+			} catch (IOException e) {
+				gitDaemon = null;
+				logger.error(MessageFormat.format("Failed to start Git daemon on {0}:{1,number,0}", bindInterface, port), e);
+			}
+		}
 	}
 	
 	protected final Logger getLogger() {
@@ -3210,10 +3275,6 @@
 	 */
 	@Override
 	public void contextInitialized(ServletContextEvent contextEvent) {
-		contextInitialized(contextEvent, contextEvent.getServletContext().getResourceAsStream("/WEB-INF/reference.properties"));
-	}
-
-	public void contextInitialized(ServletContextEvent contextEvent, InputStream referencePropertiesInputStream) {
 		servletContext = contextEvent.getServletContext();
 		if (settings == null) {
 			// Gitblit is running in a servlet container
@@ -3225,13 +3286,15 @@
 			if (!StringUtils.isEmpty(openShift)) {
 				// Gitblit is running in OpenShift/JBoss
 				File base = new File(openShift);
+				logger.info("EXPRESS contextFolder is " + contextFolder.getAbsolutePath());
 
 				// gitblit.properties setting overrides
 				File overrideFile = new File(base, "gitblit.properties");
 				webxmlSettings.applyOverrides(overrideFile);
 				
 				// Copy the included scripts to the configured groovy folder
-				File localScripts = new File(base, webxmlSettings.getString(Keys.groovy.scriptsFolder, "groovy"));
+				String path = webxmlSettings.getString(Keys.groovy.scriptsFolder, "groovy");
+				File localScripts = com.gitblit.utils.FileUtils.resolveParameter(Constants.baseFolder$, base, path);
 				if (!localScripts.exists()) {
 					File warScripts = new File(contextFolder, "/WEB-INF/data/groovy");
 					if (!warScripts.equals(localScripts)) {
@@ -3276,7 +3339,7 @@
 			}
 		}
 		
-		settingsModel = loadSettingModels(referencePropertiesInputStream);
+		settingsModel = loadSettingModels();
 		serverStatus.servletContainer = servletContext.getServerInfo();
 	}
 
@@ -3293,6 +3356,9 @@
 		if (fanoutService != null) {
 			fanoutService.stop();
 		}
+		if (gitDaemon != null) {
+			gitDaemon.stop();
+		}
 	}
 	
 	/**

--
Gitblit v1.9.1