From a31cf95ac0787eb559cb78f48c52bc6b79e970d8 Mon Sep 17 00:00:00 2001
From: James Moger <james.moger@gitblit.com>
Date: Wed, 11 Jul 2012 17:10:42 -0400
Subject: [PATCH] Forgot to commit UserModel with cookie field

---
 src/com/gitblit/GitBlit.java |  724 ++++++++++++++++++++++++++++++++++++++++++++++++++-----
 1 files changed, 658 insertions(+), 66 deletions(-)

diff --git a/src/com/gitblit/GitBlit.java b/src/com/gitblit/GitBlit.java
index ffef94a..27d43c8 100644
--- a/src/com/gitblit/GitBlit.java
+++ b/src/com/gitblit/GitBlit.java
@@ -23,14 +23,21 @@
 import java.io.InputStreamReader;
 import java.lang.reflect.Field;
 import java.text.MessageFormat;
+import java.text.SimpleDateFormat;
 import java.util.ArrayList;
 import java.util.Arrays;
 import java.util.Collection;
 import java.util.Collections;
+import java.util.Date;
 import java.util.HashMap;
+import java.util.LinkedHashMap;
+import java.util.LinkedHashSet;
 import java.util.List;
 import java.util.Map;
 import java.util.Map.Entry;
+import java.util.Set;
+import java.util.TimeZone;
+import java.util.TreeSet;
 import java.util.concurrent.ConcurrentHashMap;
 import java.util.concurrent.Executors;
 import java.util.concurrent.ScheduledExecutorService;
@@ -49,6 +56,8 @@
 import org.eclipse.jgit.lib.Repository;
 import org.eclipse.jgit.lib.RepositoryCache.FileKey;
 import org.eclipse.jgit.lib.StoredConfig;
+import org.eclipse.jgit.storage.file.WindowCache;
+import org.eclipse.jgit.storage.file.WindowCacheConfig;
 import org.eclipse.jgit.transport.resolver.FileResolver;
 import org.eclipse.jgit.transport.resolver.RepositoryResolver;
 import org.eclipse.jgit.transport.resolver.ServiceNotAuthorizedException;
@@ -66,17 +75,20 @@
 import com.gitblit.models.FederationProposal;
 import com.gitblit.models.FederationSet;
 import com.gitblit.models.Metric;
-import com.gitblit.models.ObjectCache;
 import com.gitblit.models.RepositoryModel;
+import com.gitblit.models.SearchResult;
 import com.gitblit.models.ServerSettings;
 import com.gitblit.models.ServerStatus;
 import com.gitblit.models.SettingModel;
+import com.gitblit.models.TeamModel;
 import com.gitblit.models.UserModel;
+import com.gitblit.utils.ArrayUtils;
 import com.gitblit.utils.ByteFormat;
 import com.gitblit.utils.FederationUtils;
 import com.gitblit.utils.JGitUtils;
 import com.gitblit.utils.JsonUtils;
 import com.gitblit.utils.MetricUtils;
+import com.gitblit.utils.ObjectCache;
 import com.gitblit.utils.StringUtils;
 
 /**
@@ -98,7 +110,7 @@
 public class GitBlit implements ServletContextListener {
 
 	private static GitBlit gitblit;
-
+	
 	private final Logger logger = LoggerFactory.getLogger(GitBlit.class);
 
 	private final ScheduledExecutorService scheduledExecutor = Executors.newScheduledThreadPool(5);
@@ -118,8 +130,6 @@
 
 	private File repositoriesFolder;
 
-	private boolean exportAll = true;
-
 	private IUserService userService;
 
 	private IStoredSettings settings;
@@ -129,6 +139,10 @@
 	private ServerStatus serverStatus;
 
 	private MailExecutor mailExecutor;
+	
+	private LuceneExecutor luceneExecutor;
+	
+	private TimeZone timezone;
 
 	public GitBlit() {
 		if (gitblit == null) {
@@ -157,6 +171,33 @@
 	public static boolean isGO() {
 		return self().settings instanceof FileSettings;
 	}
+	
+	/**
+	 * Returns the preferred timezone for the Gitblit instance.
+	 * 
+	 * @return a timezone
+	 */
+	public static TimeZone getTimezone() {
+		if (self().timezone == null) {
+			String tzid = getString("web.timezone", null);
+			if (StringUtils.isEmpty(tzid)) {
+				self().timezone = TimeZone.getDefault();
+				return self().timezone;
+			}
+			self().timezone = TimeZone.getTimeZone(tzid);
+		}
+		return self().timezone;
+	}
+	
+	/**
+	 * Returns the user-defined blob encodings.
+	 * 
+	 * @return an array of encodings, may be empty
+	 */
+	public static String [] getEncodings() {
+		return getStrings(Keys.web.blobEncodings).toArray(new String[0]);
+	}
+	
 
 	/**
 	 * Returns the boolean value for the specified key. If the key does not
@@ -226,6 +267,17 @@
 	}
 
 	/**
+	 * Returns a map of space-separated key-value pairs from the specified key.
+	 * 
+	 * @see IStoredSettings.getStrings(String key)
+	 * @param name
+	 * @return map of string, string
+	 */
+	public static Map<String, String> getMap(String key) {
+		return self().settings.getMap(key);
+	}
+
+	/**
 	 * Returns the list of keys whose name starts with the specified prefix. If
 	 * the prefix is null or empty, all key names are returned.
 	 * 
@@ -248,14 +300,71 @@
 	}
 
 	/**
+	 * Returns the file object for the specified configuration key.
+	 * 
+	 * @return the file
+	 */
+	public static File getFileOrFolder(String key, String defaultFileOrFolder) {
+		String fileOrFolder = GitBlit.getString(key, defaultFileOrFolder);
+		return getFileOrFolder(fileOrFolder);
+	}
+
+	/**
+	 * Returns the file object which may have it's base-path determined by
+	 * environment variables for running on a cloud hosting service. All Gitblit
+	 * file or folder retrievals are (at least initially) funneled through this
+	 * method so it is the correct point to globally override/alter filesystem
+	 * access based on environment or some other indicator.
+	 * 
+	 * @return the file
+	 */
+	public static File getFileOrFolder(String fileOrFolder) {
+		String openShift = System.getenv("OPENSHIFT_DATA_DIR");
+		if (!StringUtils.isEmpty(openShift)) {
+			// running on RedHat OpenShift
+			return new File(openShift, fileOrFolder);
+		}
+		return new File(fileOrFolder);
+	}
+
+	/**
+	 * Returns the path of the repositories folder. This method checks to see if
+	 * Gitblit is running on a cloud service and may return an adjusted path.
+	 * 
+	 * @return the repositories folder path
+	 */
+	public static File getRepositoriesFolder() {
+		return getFileOrFolder(Keys.git.repositoriesFolder, "git");
+	}
+
+	/**
+	 * Returns the path of the proposals folder. This method checks to see if
+	 * Gitblit is running on a cloud service and may return an adjusted path.
+	 * 
+	 * @return the proposals folder path
+	 */
+	public static File getProposalsFolder() {
+		return getFileOrFolder(Keys.federation.proposalsFolder, "proposals");
+	}
+
+	/**
+	 * Returns the path of the Groovy folder. This method checks to see if
+	 * Gitblit is running on a cloud service and may return an adjusted path.
+	 * 
+	 * @return the Groovy scripts folder path
+	 */
+	public static File getGroovyScriptsFolder() {
+		return getFileOrFolder(Keys.groovy.scriptsFolder, "groovy");
+	}
+
+	/**
 	 * Updates the list of server settings.
 	 * 
 	 * @param settings
 	 * @return true if the update succeeded
 	 */
-	public boolean updateSettings(Collection<SettingModel> settings) {
-		// TODO update the settings
-		return false;
+	public boolean updateSettings(Map<String, String> updatedSettings) {
+		return settings.saveSettings(updatedSettings);
 	}
 
 	public ServerStatus getStatus() {
@@ -290,6 +399,38 @@
 		logger.info("Setting up user service " + userService.toString());
 		this.userService = userService;
 		this.userService.setup(settings);
+	}
+	
+	/**
+	 * 
+	 * @return true if the user service supports credential changes
+	 */
+	public boolean supportsCredentialChanges() {
+		return userService.supportsCredentialChanges();
+	}
+
+	/**
+	 * 
+	 * @return true if the user service supports display name changes
+	 */
+	public boolean supportsDisplayNameChanges() {
+		return userService.supportsDisplayNameChanges();
+	}
+
+	/**
+	 * 
+	 * @return true if the user service supports email address changes
+	 */
+	public boolean supportsEmailAddressChanges() {
+		return userService.supportsEmailAddressChanges();
+	}
+
+	/**
+	 * 
+	 * @return true if the user service supports team membership changes
+	 */
+	public boolean supportsTeamMembershipChanges() {
+		return userService.supportsTeamMembershipChanges();
 	}
 
 	/**
@@ -371,13 +512,31 @@
 				userCookie = new Cookie(Constants.NAME, "");
 			} else {
 				// set cookie for login
-				char[] cookie = userService.getCookie(user);
-				userCookie = new Cookie(Constants.NAME, new String(cookie));
-				userCookie.setMaxAge(Integer.MAX_VALUE);
+				String cookie = userService.getCookie(user);
+				if (StringUtils.isEmpty(cookie)) {
+					// create empty cookie
+					userCookie = new Cookie(Constants.NAME, "");
+				} else {
+					// create real cookie
+					userCookie = new Cookie(Constants.NAME, cookie);
+					userCookie.setMaxAge(Integer.MAX_VALUE);
+				}
 			}
 			userCookie.setPath("/");
 			response.addCookie(userCookie);
 		}
+	}
+	
+	/**
+	 * Logout a user.
+	 * 
+	 * @param user
+	 */
+	public void logout(UserModel user) {
+		if (userService == null) {
+			return;
+		}
+		userService.logout(user);
 	}
 
 	/**
@@ -388,8 +547,18 @@
 	 */
 	public List<String> getAllUsernames() {
 		List<String> names = new ArrayList<String>(userService.getAllUsernames());
-		Collections.sort(names);
 		return names;
+	}
+
+	/**
+	 * Returns the list of all users available to the login service.
+	 * 
+	 * @see IUserService.getAllUsernames()
+	 * @return list of all usernames
+	 */
+	public List<UserModel> getAllUsers() {
+		List<UserModel> users = userService.getAllUsers();
+		return users;
 	}
 
 	/**
@@ -465,6 +634,95 @@
 	}
 
 	/**
+	 * Returns the list of available teams that a user or repository may be
+	 * assigned to.
+	 * 
+	 * @return the list of teams
+	 */
+	public List<String> getAllTeamnames() {
+		List<String> teams = new ArrayList<String>(userService.getAllTeamNames());
+		return teams;
+	}
+
+	/**
+	 * Returns the list of available teams that a user or repository may be
+	 * assigned to.
+	 * 
+	 * @return the list of teams
+	 */
+	public List<TeamModel> getAllTeams() {
+		List<TeamModel> teams = userService.getAllTeams();
+		return teams;
+	}
+
+	/**
+	 * Returns the TeamModel object for the specified name.
+	 * 
+	 * @param teamname
+	 * @return a TeamModel object or null
+	 */
+	public TeamModel getTeamModel(String teamname) {
+		return userService.getTeamModel(teamname);
+	}
+
+	/**
+	 * Returns the list of all teams who are allowed to bypass the access
+	 * restriction placed on the specified repository.
+	 * 
+	 * @see IUserService.getTeamnamesForRepositoryRole(String)
+	 * @param repository
+	 * @return list of all teamnames that can bypass the access restriction
+	 */
+	public List<String> getRepositoryTeams(RepositoryModel repository) {
+		return userService.getTeamnamesForRepositoryRole(repository.name);
+	}
+
+	/**
+	 * Sets the list of all uses who are allowed to bypass the access
+	 * restriction placed on the specified repository.
+	 * 
+	 * @see IUserService.setTeamnamesForRepositoryRole(String, List<String>)
+	 * @param repository
+	 * @param teamnames
+	 * @return true if successful
+	 */
+	public boolean setRepositoryTeams(RepositoryModel repository, List<String> repositoryTeams) {
+		return userService.setTeamnamesForRepositoryRole(repository.name, repositoryTeams);
+	}
+
+	/**
+	 * Updates the TeamModel object for the specified name.
+	 * 
+	 * @param teamname
+	 * @param team
+	 * @param isCreate
+	 */
+	public void updateTeamModel(String teamname, TeamModel team, boolean isCreate)
+			throws GitBlitException {
+		if (!teamname.equalsIgnoreCase(team.name)) {
+			if (userService.getTeamModel(team.name) != null) {
+				throw new GitBlitException(MessageFormat.format(
+						"Failed to rename ''{0}'' because ''{1}'' already exists.", teamname,
+						team.name));
+			}
+		}
+		if (!userService.updateTeamModel(teamname, team)) {
+			throw new GitBlitException(isCreate ? "Failed to add team!" : "Failed to update team!");
+		}
+	}
+
+	/**
+	 * Delete the team object with the specified teamname
+	 * 
+	 * @see IUserService.deleteTeam(String)
+	 * @param teamname
+	 * @return true if successful
+	 */
+	public boolean deleteTeam(String teamname) {
+		return userService.deleteTeam(teamname);
+	}
+
+	/**
 	 * Clears all the cached data for the specified repository.
 	 * 
 	 * @param repositoryName
@@ -481,7 +739,8 @@
 	 * @return list of all repositories
 	 */
 	public List<String> getRepositoryList() {
-		return JGitUtils.getRepositoryList(repositoriesFolder, exportAll,
+		return JGitUtils.getRepositoryList(repositoriesFolder, 
+				settings.getBoolean(Keys.git.onlyAccessBareRepositories, false),
 				settings.getBoolean(Keys.git.searchRepositoriesSubfolders, true));
 	}
 
@@ -492,21 +751,38 @@
 	 * @return repository or null
 	 */
 	public Repository getRepository(String repositoryName) {
+		return getRepository(repositoryName, true);
+	}
+
+	/**
+	 * Returns the JGit repository for the specified name.
+	 * 
+	 * @param repositoryName
+	 * @param logError
+	 * @return repository or null
+	 */
+	public Repository getRepository(String repositoryName, boolean logError) {
 		Repository r = null;
 		try {
 			r = repositoryResolver.open(null, repositoryName);
 		} catch (RepositoryNotFoundException e) {
 			r = null;
-			logger.error("GitBlit.getRepository(String) failed to find "
-					+ new File(repositoriesFolder, repositoryName).getAbsolutePath());
+			if (logError) {
+				logger.error("GitBlit.getRepository(String) failed to find "
+						+ new File(repositoriesFolder, repositoryName).getAbsolutePath());
+			}
 		} catch (ServiceNotAuthorizedException e) {
 			r = null;
-			logger.error("GitBlit.getRepository(String) failed to find "
-					+ new File(repositoriesFolder, repositoryName).getAbsolutePath(), e);
+			if (logError) {
+				logger.error("GitBlit.getRepository(String) failed to find "
+						+ new File(repositoriesFolder, repositoryName).getAbsolutePath(), e);
+			}
 		} catch (ServiceNotEnabledException e) {
 			r = null;
-			logger.error("GitBlit.getRepository(String) failed to find "
-					+ new File(repositoriesFolder, repositoryName).getAbsolutePath(), e);
+			if (logError) {
+				logger.error("GitBlit.getRepository(String) failed to find "
+						+ new File(repositoriesFolder, repositoryName).getAbsolutePath(), e);
+			}
 		}
 		return r;
 	}
@@ -557,7 +833,7 @@
 			return null;
 		}
 		if (model.accessRestriction.atLeast(AccessRestrictionType.VIEW)) {
-			if (user != null && user.canAccessRepository(model.name)) {
+			if (user != null && user.canAccessRepository(model)) {
 				return model;
 			}
 			return null;
@@ -581,7 +857,8 @@
 		RepositoryModel model = new RepositoryModel();
 		model.name = repositoryName;
 		model.hasCommits = JGitUtils.hasCommits(r);
-		model.lastChange = JGitUtils.getLastChange(r, null);
+		model.lastChange = JGitUtils.getLastChange(r);
+		model.isBare = r.isBare();
 		StoredConfig config = JGitUtils.readConfig(r);
 		if (config != null) {
 			model.description = getConfig(config, "description", "");
@@ -589,7 +866,7 @@
 			model.useTickets = getConfig(config, "useTickets", false);
 			model.useDocs = getConfig(config, "useDocs", false);
 			model.accessRestriction = AccessRestrictionType.fromName(getConfig(config,
-					"accessRestriction", null));
+					"accessRestriction", settings.getString(Keys.git.defaultAccessRestriction, null)));
 			model.showRemoteBranches = getConfig(config, "showRemoteBranches", false);
 			model.isFrozen = getConfig(config, "isFrozen", false);
 			model.showReadme = getConfig(config, "showReadme", false);
@@ -598,10 +875,26 @@
 			model.federationStrategy = FederationStrategy.fromName(getConfig(config,
 					"federationStrategy", null));
 			model.federationSets = new ArrayList<String>(Arrays.asList(config.getStringList(
-					"gitblit", null, "federationSets")));
+					Constants.CONFIG_GITBLIT, null, "federationSets")));
 			model.isFederated = getConfig(config, "isFederated", false);
 			model.origin = config.getString("remote", "origin", "url");
+			model.preReceiveScripts = new ArrayList<String>(Arrays.asList(config.getStringList(
+					Constants.CONFIG_GITBLIT, null, "preReceiveScript")));
+			model.postReceiveScripts = new ArrayList<String>(Arrays.asList(config.getStringList(
+					Constants.CONFIG_GITBLIT, null, "postReceiveScript")));
+			model.mailingLists = new ArrayList<String>(Arrays.asList(config.getStringList(
+					Constants.CONFIG_GITBLIT, null, "mailingList")));
+			model.indexedBranches = new ArrayList<String>(Arrays.asList(config.getStringList(
+					Constants.CONFIG_GITBLIT, null, "indexBranch")));
+			
+			// Custom defined properties
+			model.customFields = new LinkedHashMap<String, String>();
+			for (String aProperty : config.getNames(Constants.CONFIG_GITBLIT, Constants.CONFIG_CUSTOM_FIELDS)) {
+				model.customFields.put(aProperty, config.getString(Constants.CONFIG_GITBLIT, Constants.CONFIG_CUSTOM_FIELDS, aProperty));
+			}
 		}
+		model.HEAD = JGitUtils.getHEADRef(r);
+		model.availableRefs = JGitUtils.getAvailableHeadTargets(r);
 		r.close();
 		return model;
 	}
@@ -658,6 +951,9 @@
 				repository.close();
 			}
 		}
+		
+		// close any open index writer/searcher in the Lucene executor
+		luceneExecutor.close(repositoryName);
 	}
 
 	/**
@@ -674,7 +970,7 @@
 		if (repositoryMetricsCache.hasCurrent(model.name, model.lastChange)) {
 			return new ArrayList<Metric>(repositoryMetricsCache.getObject(model.name));
 		}
-		List<Metric> metrics = MetricUtils.getDateMetrics(repository, null, true, null);
+		List<Metric> metrics = MetricUtils.getDateMetrics(repository, null, true, null, getTimezone());
 		repositoryMetricsCache.updateObject(model.name, model.lastChange, metrics);
 		return new ArrayList<Metric>(metrics);
 	}
@@ -689,7 +985,7 @@
 	 * @return field value or defaultValue
 	 */
 	private String getConfig(StoredConfig config, String field, String defaultValue) {
-		String value = config.getString("gitblit", null, field);
+		String value = config.getString(Constants.CONFIG_GITBLIT, null, field);
 		if (StringUtils.isEmpty(value)) {
 			return defaultValue;
 		}
@@ -697,7 +993,7 @@
 	}
 
 	/**
-	 * Returns the gitblit boolean vlaue for the specified key. If key is not
+	 * Returns the gitblit boolean value for the specified key. If key is not
 	 * set, returns defaultValue.
 	 * 
 	 * @param config
@@ -706,7 +1002,7 @@
 	 * @return field value or defaultValue
 	 */
 	private boolean getConfig(StoredConfig config, String field, boolean defaultValue) {
-		return config.getBoolean("gitblit", field, defaultValue);
+		return config.getBoolean(Constants.CONFIG_GITBLIT, field, defaultValue);
 	}
 
 	/**
@@ -760,6 +1056,11 @@
 									.format("Can not rename repository ''{0}'' to ''{1}'' because ''{1}'' already exists.",
 											repositoryName, repository.name));
 				}
+				File parentFile = destFolder.getParentFile();
+				if (!parentFile.exists() && !parentFile.mkdirs()) {
+					throw new GitBlitException(MessageFormat.format(
+							"Failed to create folder ''{0}''", parentFile.getAbsolutePath()));
+				}
 				if (!folder.renameTo(destFolder)) {
 					throw new GitBlitException(MessageFormat.format(
 							"Failed to rename repository ''{0}'' to ''{1}''.", repositoryName,
@@ -792,6 +1093,18 @@
 		// update settings
 		if (r != null) {
 			updateConfiguration(r, repository);
+			// only update symbolic head if it changes
+			String currentRef = JGitUtils.getHEADRef(r);
+			if (!StringUtils.isEmpty(repository.HEAD) && !repository.HEAD.equals(currentRef)) {
+				logger.info(MessageFormat.format("Relinking {0} HEAD from {1} to {2}", 
+						repository.name, currentRef, repository.HEAD));
+				if (JGitUtils.setHEADtoRef(r, repository.HEAD)) {
+					// clear the cache
+					clearRepositoryCache(repository.name);
+				}
+			}
+
+			// close the repository object
 			r.close();
 		}
 	}
@@ -806,24 +1119,58 @@
 	 */
 	public void updateConfiguration(Repository r, RepositoryModel repository) {
 		StoredConfig config = JGitUtils.readConfig(r);
-		config.setString("gitblit", null, "description", repository.description);
-		config.setString("gitblit", null, "owner", repository.owner);
-		config.setBoolean("gitblit", null, "useTickets", repository.useTickets);
-		config.setBoolean("gitblit", null, "useDocs", repository.useDocs);
-		config.setString("gitblit", null, "accessRestriction", repository.accessRestriction.name());
-		config.setBoolean("gitblit", null, "showRemoteBranches", repository.showRemoteBranches);
-		config.setBoolean("gitblit", null, "isFrozen", repository.isFrozen);
-		config.setBoolean("gitblit", null, "showReadme", repository.showReadme);
-		config.setBoolean("gitblit", null, "skipSizeCalculation", repository.skipSizeCalculation);
-		config.setBoolean("gitblit", null, "skipSummaryMetrics", repository.skipSummaryMetrics);
-		config.setStringList("gitblit", null, "federationSets", repository.federationSets);
-		config.setString("gitblit", null, "federationStrategy",
+		config.setString(Constants.CONFIG_GITBLIT, null, "description", repository.description);
+		config.setString(Constants.CONFIG_GITBLIT, null, "owner", repository.owner);
+		config.setBoolean(Constants.CONFIG_GITBLIT, null, "useTickets", repository.useTickets);
+		config.setBoolean(Constants.CONFIG_GITBLIT, null, "useDocs", repository.useDocs);
+		config.setString(Constants.CONFIG_GITBLIT, null, "accessRestriction", repository.accessRestriction.name());
+		config.setBoolean(Constants.CONFIG_GITBLIT, null, "showRemoteBranches", repository.showRemoteBranches);
+		config.setBoolean(Constants.CONFIG_GITBLIT, null, "isFrozen", repository.isFrozen);
+		config.setBoolean(Constants.CONFIG_GITBLIT, null, "showReadme", repository.showReadme);
+		config.setBoolean(Constants.CONFIG_GITBLIT, null, "skipSizeCalculation", repository.skipSizeCalculation);
+		config.setBoolean(Constants.CONFIG_GITBLIT, null, "skipSummaryMetrics", repository.skipSummaryMetrics);
+		config.setString(Constants.CONFIG_GITBLIT, null, "federationStrategy",
 				repository.federationStrategy.name());
-		config.setBoolean("gitblit", null, "isFederated", repository.isFederated);
+		config.setBoolean(Constants.CONFIG_GITBLIT, null, "isFederated", repository.isFederated);
+
+		updateList(config, "federationSets", repository.federationSets);
+		updateList(config, "preReceiveScript", repository.preReceiveScripts);
+		updateList(config, "postReceiveScript", repository.postReceiveScripts);
+		updateList(config, "mailingList", repository.mailingLists);
+		updateList(config, "indexBranch", repository.indexedBranches);
+		
+		// User Defined Properties
+		if (repository.customFields != null) {
+			if (repository.customFields.size() == 0) {
+				// clear section
+				config.unsetSection(Constants.CONFIG_GITBLIT, Constants.CONFIG_CUSTOM_FIELDS);
+			} else {
+				for (Entry<String, String> property : repository.customFields.entrySet()) {
+					// set field
+					String key = property.getKey();
+					String value = property.getValue();
+					config.setString(Constants.CONFIG_GITBLIT, Constants.CONFIG_CUSTOM_FIELDS, key, value);
+				}
+			}
+		}
+
 		try {
 			config.save();
 		} catch (IOException e) {
 			logger.error("Failed to save repository config!", e);
+		}
+	}
+	
+	private void updateList(StoredConfig config, String field, List<String> list) {
+		// a null list is skipped, not cleared
+		// this is for RPC administration where an older manager might be used
+		if (list == null) {
+			return;
+		}
+		if (ArrayUtils.isEmpty(list)) {
+			config.unset(Constants.CONFIG_GITBLIT, null, field);
+		} else {
+			config.setStringList(Constants.CONFIG_GITBLIT, null, field, list);
 		}
 	}
 
@@ -1069,8 +1416,10 @@
 		case PULL_REPOSITORIES:
 			return token.equals(all) || token.equals(unr) || token.equals(jur);
 		case PULL_USERS:
+		case PULL_TEAMS:
 			return token.equals(all) || token.equals(unr);
 		case PULL_SETTINGS:
+		case PULL_SCRIPTS:
 			return token.equals(all);
 		}
 		return false;
@@ -1122,8 +1471,7 @@
 
 		try {
 			// make the proposals folder
-			File proposalsFolder = new File(getString(Keys.federation.proposalsFolder, "proposals")
-					.trim());
+			File proposalsFolder = getProposalsFolder();
 			proposalsFolder.mkdirs();
 
 			// cache json to a file
@@ -1155,7 +1503,7 @@
 	 */
 	public List<FederationProposal> getPendingFederationProposals() {
 		List<FederationProposal> list = new ArrayList<FederationProposal>();
-		File folder = new File(getString(Keys.federation.proposalsFolder, "proposals").trim());
+		File folder = getProposalsFolder();
 		if (folder.exists()) {
 			File[] files = folder.listFiles(new FileFilter() {
 				@Override
@@ -1278,9 +1626,148 @@
 	 * @return true if the proposal was deleted
 	 */
 	public boolean deletePendingFederationProposal(FederationProposal proposal) {
-		File folder = new File(getString(Keys.federation.proposalsFolder, "proposals").trim());
+		File folder = getProposalsFolder();
 		File file = new File(folder, proposal.token + Constants.PROPOSAL_EXT);
 		return file.delete();
+	}
+
+	/**
+	 * Returns the list of all Groovy push hook scripts. Script files must have
+	 * .groovy extension
+	 * 
+	 * @return list of available hook scripts
+	 */
+	public List<String> getAllScripts() {
+		File groovyFolder = getGroovyScriptsFolder();
+		File[] files = groovyFolder.listFiles(new FileFilter() {
+			@Override
+			public boolean accept(File pathname) {
+				return pathname.isFile() && pathname.getName().endsWith(".groovy");
+			}
+		});
+		List<String> scripts = new ArrayList<String>();
+		if (files != null) {
+			for (File file : files) {
+				String script = file.getName().substring(0, file.getName().lastIndexOf('.'));
+				scripts.add(script);
+			}
+		}
+		return scripts;
+	}
+
+	/**
+	 * Returns the list of pre-receive scripts the repository inherited from the
+	 * global settings and team affiliations.
+	 * 
+	 * @param repository
+	 *            if null only the globally specified scripts are returned
+	 * @return a list of scripts
+	 */
+	public List<String> getPreReceiveScriptsInherited(RepositoryModel repository) {
+		Set<String> scripts = new LinkedHashSet<String>();
+		// Globals
+		for (String script : getStrings(Keys.groovy.preReceiveScripts)) {
+			if (script.endsWith(".groovy")) {
+				scripts.add(script.substring(0, script.lastIndexOf('.')));
+			} else {
+				scripts.add(script);
+			}
+		}
+
+		// Team Scripts
+		if (repository != null) {
+			for (String teamname : userService.getTeamnamesForRepositoryRole(repository.name)) {
+				TeamModel team = userService.getTeamModel(teamname);
+				scripts.addAll(team.preReceiveScripts);
+			}
+		}
+		return new ArrayList<String>(scripts);
+	}
+
+	/**
+	 * Returns the list of all available Groovy pre-receive push hook scripts
+	 * that are not already inherited by the repository. Script files must have
+	 * .groovy extension
+	 * 
+	 * @param repository
+	 *            optional parameter
+	 * @return list of available hook scripts
+	 */
+	public List<String> getPreReceiveScriptsUnused(RepositoryModel repository) {
+		Set<String> inherited = new TreeSet<String>(getPreReceiveScriptsInherited(repository));
+
+		// create list of available scripts by excluding inherited scripts
+		List<String> scripts = new ArrayList<String>();
+		for (String script : getAllScripts()) {
+			if (!inherited.contains(script)) {
+				scripts.add(script);
+			}
+		}
+		return scripts;
+	}
+
+	/**
+	 * Returns the list of post-receive scripts the repository inherited from
+	 * the global settings and team affiliations.
+	 * 
+	 * @param repository
+	 *            if null only the globally specified scripts are returned
+	 * @return a list of scripts
+	 */
+	public List<String> getPostReceiveScriptsInherited(RepositoryModel repository) {
+		Set<String> scripts = new LinkedHashSet<String>();
+		// Global Scripts
+		for (String script : getStrings(Keys.groovy.postReceiveScripts)) {
+			if (script.endsWith(".groovy")) {
+				scripts.add(script.substring(0, script.lastIndexOf('.')));
+			} else {
+				scripts.add(script);
+			}
+		}
+		// Team Scripts
+		if (repository != null) {
+			for (String teamname : userService.getTeamnamesForRepositoryRole(repository.name)) {
+				TeamModel team = userService.getTeamModel(teamname);
+				scripts.addAll(team.postReceiveScripts);
+			}
+		}
+		return new ArrayList<String>(scripts);
+	}
+
+	/**
+	 * Returns the list of unused Groovy post-receive push hook scripts that are
+	 * not already inherited by the repository. Script files must have .groovy
+	 * extension
+	 * 
+	 * @param repository
+	 *            optional parameter
+	 * @return list of available hook scripts
+	 */
+	public List<String> getPostReceiveScriptsUnused(RepositoryModel repository) {
+		Set<String> inherited = new TreeSet<String>(getPostReceiveScriptsInherited(repository));
+
+		// create list of available scripts by excluding inherited scripts
+		List<String> scripts = new ArrayList<String>();
+		for (String script : getAllScripts()) {
+			if (!inherited.contains(script)) {
+				scripts.add(script);
+			}
+		}
+		return scripts;
+	}
+	
+	/**
+	 * Search the specified repositories using the Lucene query.
+	 * 
+	 * @param query
+	 * @param page
+	 * @param pageSize
+	 * @param repositories
+	 * @return
+	 */
+	public List<SearchResult> search(String query, int page, int pageSize, List<String> repositories) {		
+		List<SearchResult> srs = luceneExecutor.search(query, page, pageSize, repositories);
+		return srs;
 	}
 
 	/**
@@ -1289,9 +1776,40 @@
 	 * @param subject
 	 * @param message
 	 */
-	public void notifyAdministrators(String subject, String message) {
+	public void sendMailToAdministrators(String subject, String message) {
 		try {
 			Message mail = mailExecutor.createMessageForAdministrators();
+			if (mail != null) {
+				mail.setSubject(subject);
+				mail.setText(message);
+				mailExecutor.queue(mail);
+			}
+		} catch (MessagingException e) {
+			logger.error("Messaging error", e);
+		}
+	}
+
+	/**
+	 * Notify users by email of something.
+	 * 
+	 * @param subject
+	 * @param message
+	 * @param toAddresses
+	 */
+	public void sendMail(String subject, String message, Collection<String> toAddresses) {
+		this.sendMail(subject, message, toAddresses.toArray(new String[0]));
+	}
+
+	/**
+	 * Notify users by email of something.
+	 * 
+	 * @param subject
+	 * @param message
+	 * @param toAddresses
+	 */
+	public void sendMail(String subject, String message, String... toAddresses) {
+		try {
+			Message mail = mailExecutor.createMessage(toAddresses);
 			if (mail != null) {
 				mail.setSubject(subject);
 				mail.setText(message);
@@ -1309,7 +1827,17 @@
 	 */
 	public ServerSettings getSettingsModel() {
 		// ensure that the current values are updated in the setting models
-		settingsModel.updateCurrentValues(settings);
+		for (String key : settings.getAllKeys(null)) {
+			SettingModel setting = settingsModel.get(key);
+			if (setting == null) {
+				// unreferenced setting, create a setting model
+				setting = new SettingModel();
+				setting.name = key;
+				settingsModel.add(setting);
+			}
+			setting.currentValue = settings.getString(key, "");			
+		}
+		settingsModel.pushScripts = getAllScripts();
 		return settingsModel;
 	}
 
@@ -1322,11 +1850,15 @@
 	 */
 	private ServerSettings loadSettingModels() {
 		ServerSettings settingsModel = new ServerSettings();
+		settingsModel.supportsCredentialChanges = userService.supportsCredentialChanges();
+		settingsModel.supportsDisplayNameChanges = userService.supportsDisplayNameChanges();
+		settingsModel.supportsEmailAddressChanges = userService.supportsEmailAddressChanges();
+		settingsModel.supportsTeamMembershipChanges = userService.supportsTeamMembershipChanges();
 		try {
 			// Read bundled Gitblit properties to extract setting descriptions.
 			// This copy is pristine and only used for populating the setting
 			// models map.
-			InputStream is = servletContext.getResourceAsStream("/WEB-INF/gitblit.properties");
+			InputStream is = servletContext.getResourceAsStream("/WEB-INF/reference.properties");
 			BufferedReader propertiesReader = new BufferedReader(new InputStreamReader(is));
 			StringBuilder description = new StringBuilder();
 			SettingModel setting = new SettingModel();
@@ -1388,42 +1920,66 @@
 	public void configureContext(IStoredSettings settings, boolean startFederation) {
 		logger.info("Reading configuration from " + settings.toString());
 		this.settings = settings;
-		repositoriesFolder = new File(settings.getString(Keys.git.repositoriesFolder, "git"));
+		repositoriesFolder = getRepositoriesFolder();
 		logger.info("Git repositories folder " + repositoriesFolder.getAbsolutePath());
-		repositoryResolver = new FileResolver<Void>(repositoriesFolder, exportAll);
-		serverStatus = new ServerStatus();
+		repositoryResolver = new FileResolver<Void>(repositoriesFolder, true);
+		
+		logTimezone("JVM", TimeZone.getDefault());
+		logTimezone(Constants.NAME, getTimezone());
+
+		serverStatus = new ServerStatus(isGO());
 		String realm = settings.getString(Keys.realm.userService, "users.properties");
 		IUserService loginService = null;
 		try {
 			// check to see if this "file" is a login service class
 			Class<?> realmClass = Class.forName(realm);
-			if (IUserService.class.isAssignableFrom(realmClass)) {
-				loginService = (IUserService) realmClass.newInstance();
-			}
+			loginService = (IUserService) realmClass.newInstance();
 		} catch (Throwable t) {
-			// not a login service class or class could not be instantiated.
-			// try to use default file login service
-			File realmFile = new File(realm);
-			if (!realmFile.exists()) {
-				try {
-					realmFile.createNewFile();
-				} catch (IOException x) {
-					logger.error(
-							MessageFormat.format("COULD NOT CREATE REALM FILE {0}!", realmFile), x);
-				}
-			}
-			loginService = new FileUserService(realmFile);
+			loginService = new GitblitUserService();
 		}
 		setUserService(loginService);
 		mailExecutor = new MailExecutor(settings);
 		if (mailExecutor.isReady()) {
+			logger.info("Mail executor is scheduled to process the message queue every 2 minutes.");
 			scheduledExecutor.scheduleAtFixedRate(mailExecutor, 1, 2, TimeUnit.MINUTES);
 		} else {
 			logger.warn("Mail server is not properly configured.  Mail services disabled.");
 		}
+		luceneExecutor = new LuceneExecutor(settings, repositoriesFolder);
+		logger.info("Lucene executor is scheduled to process indexed branches every 2 minutes.");
+		scheduledExecutor.scheduleAtFixedRate(luceneExecutor, 1, 2, TimeUnit.MINUTES);
 		if (startFederation) {
 			configureFederation();
 		}
+		
+		// Configure JGit
+		WindowCacheConfig cfg = new WindowCacheConfig();
+		
+		cfg.setPackedGitWindowSize(settings.getFilesize(Keys.git.packedGitWindowSize, cfg.getPackedGitWindowSize()));
+		cfg.setPackedGitLimit(settings.getFilesize(Keys.git.packedGitLimit, cfg.getPackedGitLimit()));
+		cfg.setDeltaBaseCacheLimit(settings.getFilesize(Keys.git.deltaBaseCacheLimit, cfg.getDeltaBaseCacheLimit()));
+		cfg.setPackedGitOpenFiles(settings.getFilesize(Keys.git.packedGitOpenFiles, cfg.getPackedGitOpenFiles()));
+		cfg.setStreamFileThreshold(settings.getFilesize(Keys.git.streamFileThreshold, cfg.getStreamFileThreshold()));
+		cfg.setPackedGitMMAP(settings.getBoolean(Keys.git.packedGitMmap, cfg.isPackedGitMMAP()));
+		
+		try {
+			WindowCache.reconfigure(cfg);
+			logger.debug(MessageFormat.format("{0} = {1,number,0}", Keys.git.packedGitWindowSize, cfg.getPackedGitWindowSize()));
+			logger.debug(MessageFormat.format("{0} = {1,number,0}", Keys.git.packedGitLimit, cfg.getPackedGitLimit()));
+			logger.debug(MessageFormat.format("{0} = {1,number,0}", Keys.git.deltaBaseCacheLimit, cfg.getDeltaBaseCacheLimit()));
+			logger.debug(MessageFormat.format("{0} = {1,number,0}", Keys.git.packedGitOpenFiles, cfg.getPackedGitOpenFiles()));
+			logger.debug(MessageFormat.format("{0} = {1,number,0}", Keys.git.streamFileThreshold, cfg.getStreamFileThreshold()));
+			logger.debug(MessageFormat.format("{0} = {1}", Keys.git.packedGitMmap, cfg.isPackedGitMMAP()));
+		} catch (IllegalArgumentException e) {
+			logger.error("Failed to configure JGit parameters!", e);
+		}
+	}
+	
+	private void logTimezone(String type, TimeZone zone) {
+		SimpleDateFormat df = new SimpleDateFormat("z Z");
+		df.setTimeZone(zone);
+		String offset = df.format(new Date());
+		logger.info(type + " timezone is " + zone.getID() + " (" + offset + ")");
 	}
 
 	/**
@@ -1435,12 +1991,47 @@
 	@Override
 	public void contextInitialized(ServletContextEvent contextEvent) {
 		servletContext = contextEvent.getServletContext();
-		settingsModel = loadSettingModels();
 		if (settings == null) {
 			// Gitblit WAR is running in a servlet container
-			WebXmlSettings webxmlSettings = new WebXmlSettings(contextEvent.getServletContext());
+			ServletContext context = contextEvent.getServletContext();
+			WebXmlSettings webxmlSettings = new WebXmlSettings(context);
+
+			// 0.7.0 web.properties in the deployed war folder
+			String webProps = context.getRealPath("/WEB-INF/web.properties");
+			if (!StringUtils.isEmpty(webProps)) {
+				File overrideFile = new File(webProps);
+				if (overrideFile.exists()) {
+					webxmlSettings.applyOverrides(overrideFile);
+				}
+			}
+			
+
+			// 0.8.0 gitblit.properties file located outside the deployed war
+			// folder lie, for example, on RedHat OpenShift.
+			File overrideFile = getFileOrFolder("gitblit.properties");
+			if (!overrideFile.getPath().equals("gitblit.properties")) {
+				webxmlSettings.applyOverrides(overrideFile);
+			}
 			configureContext(webxmlSettings, true);
+
+			// Copy the included scripts to the configured groovy folder
+			File localScripts = getFileOrFolder(Keys.groovy.scriptsFolder, "groovy");
+			if (!localScripts.exists()) {
+				File includedScripts = new File(context.getRealPath("/WEB-INF/groovy"));
+				if (!includedScripts.equals(localScripts)) {
+					try {
+						com.gitblit.utils.FileUtils.copy(localScripts, includedScripts.listFiles());
+					} catch (IOException e) {
+						logger.error(MessageFormat.format(
+								"Failed to copy included Groovy scripts from {0} to {1}",
+								includedScripts, localScripts));
+					}
+				}
+			}
 		}
+		
+		settingsModel = loadSettingModels();
+		serverStatus.servletContainer = servletContext.getServerInfo();
 	}
 
 	/**
@@ -1451,5 +2042,6 @@
 	public void contextDestroyed(ServletContextEvent contextEvent) {
 		logger.info("Gitblit context destroyed by servlet container.");
 		scheduledExecutor.shutdownNow();
+		luceneExecutor.close();
 	}
 }

--
Gitblit v1.9.1